Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AL358933.1-201ENST00000565046 2830 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 SEPT7P7-201ENST00000420492 1301 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AL596276.2-201ENST00000447525 331 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 RN7SL258P-201ENST00000478664 300 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 OR52A4P-202ENST00000481634 799 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 OR52A4P-203ENST00000498233 1014 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 MRPL22P1-201ENST00000505398 616 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC140658.4-201ENST00000561990 352 ntBASIC12.74□□□□□ -0.37
USB1Q9BQ65 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
USB1Q9BQ65 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
USB1Q9BQ65 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC018529.2-202ENST00000611482 3087 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms