Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 MTX1P1-201ENST00000440904 838 ntBASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 RNMTL1P1-201ENST00000454103 560 ntBASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 TUBB8P8-201ENST00000458717 1058 ntBASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AC005730.2-201ENST00000564549 1184 ntBASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AC010328.2-201ENST00000597698 1111 ntBASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 AC024075.2-201ENST00000598112 1473 ntBASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC50Q8IVM0 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 AC005034.1-201ENST00000426657 489 ntBASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 GAPDHP21-201ENST00000450301 1010 ntBASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 AL359845.1-201ENST00000458202 1648 ntBASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 RPL18P13-201ENST00000478088 569 ntBASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 DUX4L45-201ENST00000566406 1057 ntBASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 AL139158.3-201ENST00000641212 1562 ntBASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCDC50Q8IVM0 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC50Q8IVM0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms