Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AC055811.3-201ENST00000584952 686 ntBASIC15.47■□□□□ 0.07
TRIM50Q86XT4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AP005264.6-204ENST00000588436 719 ntBASIC15.47■□□□□ 0.07
TRIM50Q86XT4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM50Q86XT4 AC073869.1-201ENST00000415574 2762 ntBASIC15.47■□□□□ 0.07
TRIM50Q86XT4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 DKKL1P1-201ENST00000400550 698 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 GGTLC4P-201ENST00000402176 664 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 KRT17P4-201ENST00000429445 819 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AC010234.1-201ENST00000494599 870 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 MIR4326-201ENST00000582203 59 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AL139424.3-202ENST00000641619 917 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 Z98885.3-201ENST00000624882 1757 ntBASIC15.46■□□□□ 0.07
TRIM50Q86XT4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM50Q86XT4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM50Q86XT4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.46■□□□□ 0.06
TRIM50Q86XT4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.46■□□□□ 0.06
TRIM50Q86XT4 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM50Q86XT4 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TRIM50Q86XT4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM50Q86XT4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM50Q86XT4 ABCD1P4-201ENST00000399687 604 ntBASIC15.45■□□□□ 0.06
TRIM50Q86XT4 MIR1227-201ENST00000408484 88 ntBASIC15.45■□□□□ 0.06
TRIM50Q86XT4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms