Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H6P61129 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H6P61129 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 RPSAP16-201ENST00000447583 821 ntBASIC18.23■□□□□ 0.51
ZC3H6P61129 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H6P61129 AL161727.1-201ENST00000457409 530 ntBASIC18.23■□□□□ 0.51
ZC3H6P61129 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H6P61129 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC18.23■□□□□ 0.51
ZC3H6P61129 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC18.23■□□□□ 0.51
ZC3H6P61129 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H6P61129 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC18.23■□□□□ 0.51
ZC3H6P61129 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H6P61129 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H6P61129 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 STX3-207ENST00000633708 3111 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H6P61129 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 AL928654.5-201ENST00000624831 2501 ntBASIC18.22■□□□□ 0.51
ZC3H6P61129 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 SAP18P2-201ENST00000434334 459 ntBASIC18.22■□□□□ 0.51
ZC3H6P61129 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC18.22■□□□□ 0.51
ZC3H6P61129 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.22■□□□□ 0.51
ZC3H6P61129 EMP3-204ENST00000596315 761 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H6P61129 AC136475.7-201ENST00000602949 592 ntBASIC18.22■□□□□ 0.51
ZC3H6P61129 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC18.22■□□□□ 0.51
ZC3H6P61129 PSME2-217ENST00000615264 874 ntTSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 PSME2-218ENST00000630027 185 ntTSL 3 BASIC18.22■□□□□ 0.51
ZC3H6P61129 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ZC3H6P61129 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H6P61129 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.22■□□□□ 0.51
ZC3H6P61129 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H6P61129 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ZC3H6P61129 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC18.21■□□□□ 0.51
ZC3H6P61129 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ZC3H6P61129 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ZC3H6P61129 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC18.21■□□□□ 0.51
ZC3H6P61129 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.21■□□□□ 0.51
ZC3H6P61129 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC18.21■□□□□ 0.51
ZC3H6P61129 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC18.21■□□□□ 0.51
ZC3H6P61129 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC18.21■□□□□ 0.51
ZC3H6P61129 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC18.21■□□□□ 0.51
ZC3H6P61129 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC18.21■□□□□ 0.51
ZC3H6P61129 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC18.21■□□□□ 0.51
ZC3H6P61129 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC18.21■□□□□ 0.51
ZC3H6P61129 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.21■□□□□ 0.51
ZC3H6P61129 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
ZC3H6P61129 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 AC046158.3-201ENST00000624947 2558 ntBASIC18.21■□□□□ 0.51
ZC3H6P61129 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H6P61129 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.21■□□□□ 0.51
ZC3H6P61129 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms