Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 HINT1-208ENST00000513012 583 ntTSL 4 BASIC14.9□□□□□ -0.02
BRCA2P51587 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
BRCA2P51587 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
BRCA2P51587 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCA2P51587 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.89□□□□□ -0.03
BRCA2P51587 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 AL606760.3-201ENST00000569869 3591 ntBASIC14.89□□□□□ -0.03
BRCA2P51587 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRCA2P51587 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
BRCA2P51587 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 MIR602-201ENST00000384960 98 ntBASIC14.89□□□□□ -0.03
BRCA2P51587 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC14.89□□□□□ -0.03
BRCA2P51587 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC14.89□□□□□ -0.03
BRCA2P51587 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 WSB1-213ENST00000583193 552 ntTSL 4 BASIC14.89□□□□□ -0.03
BRCA2P51587 CARS-216ENST00000639317 135 ntTSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRCA2P51587 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
BRCA2P51587 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 AP000346.2-202ENST00000425948 383 ntBASIC14.89□□□□□ -0.03
BRCA2P51587 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC14.89□□□□□ -0.03
BRCA2P51587 AC010395.2-201ENST00000509899 904 ntBASIC14.89□□□□□ -0.03
BRCA2P51587 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.89□□□□□ -0.03
BRCA2P51587 SARS2-211ENST00000598831 665 ntTSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 PIGA-209ENST00000634582 965 ntTSL 2 BASIC14.89□□□□□ -0.03
BRCA2P51587 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC14.89□□□□□ -0.03
BRCA2P51587 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC14.89□□□□□ -0.03
BRCA2P51587 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
BRCA2P51587 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRCA2P51587 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
BRCA2P51587 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 LINC01230-201ENST00000625222 3017 ntBASIC14.88□□□□□ -0.03
BRCA2P51587 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC14.88□□□□□ -0.03
BRCA2P51587 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCA2P51587 AF013593.1-201ENST00000458074 1487 ntBASIC14.88□□□□□ -0.03
BRCA2P51587 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCA2P51587 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCA2P51587 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCA2P51587 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 OR7E122P-201ENST00000383606 1017 ntBASIC14.88□□□□□ -0.03
BRCA2P51587 CXXC1P1-202ENST00000489409 1212 ntBASIC14.88□□□□□ -0.03
BRCA2P51587 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCA2P51587 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCA2P51587 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCA2P51587 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCA2P51587 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCA2P51587 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCA2P51587 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
BRCA2P51587 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
BRCA2P51587 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCA2P51587 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCA2P51587 POM121L14P-201ENST00000406100 1558 ntBASIC14.87□□□□□ -0.03
BRCA2P51587 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCA2P51587 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
BRCA2P51587 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCA2P51587 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.87□□□□□ -0.03
BRCA2P51587 AC011239.2-201ENST00000624820 1489 ntBASIC14.87□□□□□ -0.03
BRCA2P51587 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRCA2P51587 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
BRCA2P51587 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCA2P51587 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCA2P51587 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC14.87□□□□□ -0.03
BRCA2P51587 AC007279.1-201ENST00000448547 837 ntBASIC14.87□□□□□ -0.03
BRCA2P51587 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms