Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HLCSP50747 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.38□□□□□ -0.27
HLCSP50747 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.38□□□□□ -0.27
HLCSP50747 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.38□□□□□ -0.27
HLCSP50747 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.38□□□□□ -0.27
HLCSP50747 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 KRT18P36-201ENST00000411618 1276 ntBASIC13.38□□□□□ -0.27
HLCSP50747 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.38□□□□□ -0.27
HLCSP50747 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.38□□□□□ -0.27
HLCSP50747 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.38□□□□□ -0.27
HLCSP50747 IMP3P2-201ENST00000489760 475 ntBASIC13.38□□□□□ -0.27
HLCSP50747 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 AC027237.1-201ENST00000560942 655 ntBASIC13.38□□□□□ -0.27
HLCSP50747 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 RN7SL574P-201ENST00000581512 297 ntBASIC13.38□□□□□ -0.27
HLCSP50747 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.38□□□□□ -0.27
HLCSP50747 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.38□□□□□ -0.27
HLCSP50747 AL731571.1-201ENST00000617058 5428 ntBASIC13.38□□□□□ -0.27
HLCSP50747 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.38□□□□□ -0.27
HLCSP50747 AC018629.1-201ENST00000623381 1736 ntBASIC13.38□□□□□ -0.27
HLCSP50747 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HLCSP50747 AL445250.1-201ENST00000641671 2259 ntBASIC13.38□□□□□ -0.27
HLCSP50747 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HLCSP50747 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.38□□□□□ -0.27
HLCSP50747 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HLCSP50747 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.37□□□□□ -0.27
HLCSP50747 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.37□□□□□ -0.27
HLCSP50747 RNA5SP423-201ENST00000517127 109 ntBASIC13.37□□□□□ -0.27
HLCSP50747 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 AC003686.1-201ENST00000550956 1034 ntBASIC13.37□□□□□ -0.27
HLCSP50747 FGFR3P5-201ENST00000564496 886 ntBASIC13.37□□□□□ -0.27
HLCSP50747 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.37□□□□□ -0.27
HLCSP50747 AC020922.3-201ENST00000595064 547 ntBASIC13.37□□□□□ -0.27
HLCSP50747 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.37□□□□□ -0.27
HLCSP50747 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.37□□□□□ -0.27
HLCSP50747 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 AL353770.1-201ENST00000614915 403 ntBASIC13.37□□□□□ -0.27
HLCSP50747 BAP1-211ENST00000615113 489 ntBASIC13.37□□□□□ -0.27
HLCSP50747 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 AC092299.1-201ENST00000632679 757 ntBASIC13.37□□□□□ -0.27
HLCSP50747 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HLCSP50747 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLCSP50747 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms