Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
LHX2P50458 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.36□□□□□ -0.43
LHX2P50458 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.36□□□□□ -0.43
LHX2P50458 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 AC013553.1-201ENST00000560906 267 ntBASIC12.36□□□□□ -0.43
LHX2P50458 CES1P2-201ENST00000566467 1242 ntBASIC12.36□□□□□ -0.43
LHX2P50458 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.36□□□□□ -0.43
LHX2P50458 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.36□□□□□ -0.43
LHX2P50458 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.36□□□□□ -0.43
LHX2P50458 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LHX2P50458 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 MARK2P9-201ENST00000430958 1727 ntBASIC12.36□□□□□ -0.43
LHX2P50458 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.36□□□□□ -0.43
LHX2P50458 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 GULOP-201ENST00000454030 748 ntBASIC12.35□□□□□ -0.43
LHX2P50458 AC079250.1-201ENST00000456046 531 ntBASIC12.35□□□□□ -0.43
LHX2P50458 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.35□□□□□ -0.43
LHX2P50458 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.35□□□□□ -0.43
LHX2P50458 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 MIR5196-201ENST00000578146 115 ntBASIC12.35□□□□□ -0.43
LHX2P50458 TRMT112P3-201ENST00000580149 358 ntBASIC12.35□□□□□ -0.43
LHX2P50458 AC009084.3-201ENST00000623356 437 ntBASIC12.35□□□□□ -0.43
LHX2P50458 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.35□□□□□ -0.43
LHX2P50458 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.35□□□□□ -0.43
LHX2P50458 AC092115.1-201ENST00000566277 1402 ntBASIC12.35□□□□□ -0.43
LHX2P50458 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.35□□□□□ -0.43
LHX2P50458 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.35□□□□□ -0.43
LHX2P50458 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LHX2P50458 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.35□□□□□ -0.43
LHX2P50458 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.34□□□□□ -0.43
LHX2P50458 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LHX2P50458 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms