Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.95□□□□□ -0.02
SSR1P43307 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 AC007952.5-201ENST00000572818 1486 ntBASIC14.95□□□□□ -0.02
SSR1P43307 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SSR1P43307 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SSR1P43307 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.94□□□□□ -0.02
SSR1P43307 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SSR1P43307 KRT18P36-201ENST00000411618 1276 ntBASIC14.94□□□□□ -0.02
SSR1P43307 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.94□□□□□ -0.02
SSR1P43307 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 RPL13AP20-201ENST00000459725 609 ntBASIC14.94□□□□□ -0.02
SSR1P43307 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.94□□□□□ -0.02
SSR1P43307 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.94□□□□□ -0.02
SSR1P43307 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.94□□□□□ -0.02
SSR1P43307 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.94□□□□□ -0.02
SSR1P43307 KRT18P8-201ENST00000581937 1246 ntBASIC14.94□□□□□ -0.02
SSR1P43307 AC134407.3-201ENST00000624035 2139 ntBASIC14.94□□□□□ -0.02
SSR1P43307 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 AL358933.1-201ENST00000565046 2830 ntBASIC14.94□□□□□ -0.02
SSR1P43307 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SSR1P43307 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSR1P43307 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.94□□□□□ -0.02
SSR1P43307 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.94□□□□□ -0.02
SSR1P43307 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSR1P43307 AP002353.1-201ENST00000528257 1599 ntBASIC14.94□□□□□ -0.02
SSR1P43307 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SSR1P43307 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 AC004899.1-201ENST00000424687 1714 ntBASIC14.93□□□□□ -0.02
SSR1P43307 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 AC092580.1-201ENST00000433998 658 ntBASIC14.93□□□□□ -0.02
SSR1P43307 KRT18P15-201ENST00000458108 1291 ntBASIC14.93□□□□□ -0.02
SSR1P43307 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.93□□□□□ -0.02
SSR1P43307 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.93□□□□□ -0.02
SSR1P43307 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.93□□□□□ -0.02
SSR1P43307 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms