Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC3P19447 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC3P19447 RN7SL596P-201ENST00000582123 288 ntBASIC16.14■□□□□ 0.17
ERCC3P19447 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ERCC3P19447 MIR6746-201ENST00000620971 63 ntBASIC16.14■□□□□ 0.17
ERCC3P19447 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ERCC3P19447 AC131212.3-201ENST00000624087 4219 ntBASIC16.14■□□□□ 0.17
ERCC3P19447 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC3P19447 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 SHMT1P1-201ENST00000419974 1312 ntBASIC16.14■□□□□ 0.17
ERCC3P19447 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC3P19447 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC3P19447 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC3P19447 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ERCC3P19447 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 TBC1D27-202ENST00000424239 1573 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 AC138761.6-201ENST00000583997 1423 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 AL022313.4-201ENST00000562756 2046 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ERCC3P19447 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC3P19447 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC3P19447 AC008026.2-201ENST00000495438 348 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 GOLGA2P8-201ENST00000505201 779 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ERCC3P19447 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC3P19447 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 GOLGA2P7-209ENST00000560408 745 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC3P19447 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC3P19447 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ERCC3P19447 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC3P19447 AP005264.6-204ENST00000588436 719 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.13■□□□□ 0.17
ERCC3P19447 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ERCC3P19447 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC3P19447 HSPA8P5-201ENST00000456928 2069 ntBASIC16.13■□□□□ 0.17
ERCC3P19447 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC3P19447 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ERCC3P19447 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC3P19447 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC3P19447 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC3P19447 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC3P19447 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERCC3P19447 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC3P19447 AL365181.3-201ENST00000605886 3222 ntBASIC16.12■□□□□ 0.17
ERCC3P19447 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.12■□□□□ 0.17
ERCC3P19447 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC3P19447 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 RPL3P2-204ENST00000413027 1203 ntBASIC16.12■□□□□ 0.17
ERCC3P19447 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC3P19447 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.12■□□□□ 0.17
ERCC3P19447 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.12■□□□□ 0.17
ERCC3P19447 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC3P19447 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC3P19447 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.12■□□□□ 0.17
ERCC3P19447 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.12■□□□□ 0.17
ERCC3P19447 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.12■□□□□ 0.17
ERCC3P19447 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC3P19447 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC3P19447 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERCC3P19447 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.12■□□□□ 0.17
ERCC3P19447 AC006483.2-201ENST00000609813 515 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms