Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AL591163.1-201ENST00000641757 987 ntBASIC11.94□□□□□ -0.5
TMEM235A6NFC5 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AC073957.3-201ENST00000609998 6758 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AC092117.1-201ENST00000621230 3250 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AC092933.1-201ENST00000393644 945 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 DGCR5-201ENST00000399539 862 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 BCRP2-202ENST00000447763 634 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 BCRP6-201ENST00000510112 632 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 BCRP7-201ENST00000511549 544 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 LINC02560-201ENST00000596379 459 ntBASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
TMEM235A6NFC5 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 HSPA8P9-201ENST00000485881 1943 ntBASIC11.92□□□□□ -0.5
TMEM235A6NFC5 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 AC093462.1-201ENST00000621167 1683 ntBASIC11.92□□□□□ -0.5
TMEM235A6NFC5 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 AC003958.1-201ENST00000435883 421 ntBASIC11.92□□□□□ -0.5
TMEM235A6NFC5 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 FAM207CP-201ENST00000443486 507 ntBASIC11.92□□□□□ -0.5
TMEM235A6NFC5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 HIST2H2BB-201ENST00000449108 381 ntBASIC11.92□□□□□ -0.5
TMEM235A6NFC5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms