Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
POLR2J2Q9GZM3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR2J2Q9GZM3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR2J2Q9GZM3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
POLR2J2Q9GZM3 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 MARK2P16-201ENST00000605714 1723 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AC078875.1-201ENST00000431907 724 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AC021723.1-201ENST00000486306 515 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 RAB43P1-201ENST00000561790 589 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AC092299.1-201ENST00000632679 757 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AL139424.3-202ENST00000641619 917 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AC105233.6-201ENST00000642093 218 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 CICP1-201ENST00000416803 2410 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 FMO6P-201ENST00000236166 1620 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 AC004623.1-201ENST00000624592 2127 ntBASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
POLR2J2Q9GZM3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 CSF2RBP1-201ENST00000447905 391 ntBASIC12.93□□□□□ -0.34
POLR2J2Q9GZM3 EIF4HP1-201ENST00000453115 687 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms