Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 CTBP2P5-201ENST00000454986 1264 ntBASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 MIR3940-201ENST00000579148 102 ntBASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 AC079336.7-201ENST00000623428 1078 ntBASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 PCDHA6-201ENST00000378126 3267 ntBASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 AC004554.1-201ENST00000422830 1468 ntBASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PHACTR1Q9C0D0 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 HSPA8P9-201ENST00000485881 1943 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 PCDHB19P-202ENST00000625133 2914 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 BX679664.3-201ENST00000414070 555 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC010740.1-201ENST00000417035 684 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC005034.1-201ENST00000426657 489 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC234783.1-201ENST00000441761 496 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC113935.1-201ENST00000471722 555 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 DUX4L45-201ENST00000566406 1057 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC106886.1-201ENST00000568660 600 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 MIR3615-201ENST00000581999 87 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC008805.1-201ENST00000590892 364 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 AC239800.4-201ENST00000603712 296 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 CICP1-201ENST00000416803 2410 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms