Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC15.87■□□□□ 0.13
ERCC4Q92889 SHMT1P1-201ENST00000419974 1312 ntBASIC15.87■□□□□ 0.13
ERCC4Q92889 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.87■□□□□ 0.13
ERCC4Q92889 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC4Q92889 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC4Q92889 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ERCC4Q92889 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC4Q92889 FAM90A7P-201ENST00000382628 1395 ntBASIC15.87■□□□□ 0.13
ERCC4Q92889 FAM90A23P-201ENST00000400136 1395 ntBASIC15.87■□□□□ 0.13
ERCC4Q92889 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC4Q92889 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 LINC01815-202ENST00000641468 1409 ntBASIC15.86■□□□□ 0.13
ERCC4Q92889 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.86■□□□□ 0.13
ERCC4Q92889 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 U91328.1-201ENST00000437528 223 ntBASIC15.86■□□□□ 0.13
ERCC4Q92889 AC234783.1-201ENST00000441761 496 ntBASIC15.86■□□□□ 0.13
ERCC4Q92889 CSF2RBP1-201ENST00000447905 391 ntBASIC15.86■□□□□ 0.13
ERCC4Q92889 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 AC140658.4-201ENST00000561990 352 ntBASIC15.86■□□□□ 0.13
ERCC4Q92889 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.86■□□□□ 0.13
ERCC4Q92889 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.86■□□□□ 0.13
ERCC4Q92889 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
ERCC4Q92889 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 AC009542.2-202ENST00000619004 1067 ntBASIC15.86■□□□□ 0.13
ERCC4Q92889 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 LINC01165-201ENST00000445190 1623 ntBASIC15.86■□□□□ 0.13
ERCC4Q92889 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC4Q92889 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC4Q92889 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
ERCC4Q92889 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ERCC4Q92889 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ERCC4Q92889 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.85■□□□□ 0.13
ERCC4Q92889 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC4Q92889 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC4Q92889 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.85■□□□□ 0.13
ERCC4Q92889 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.85■□□□□ 0.13
ERCC4Q92889 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC4Q92889 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC4Q92889 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.85■□□□□ 0.13
ERCC4Q92889 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.85■□□□□ 0.13
ERCC4Q92889 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.85■□□□□ 0.13
ERCC4Q92889 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.85■□□□□ 0.13
ERCC4Q92889 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.85■□□□□ 0.13
ERCC4Q92889 EEF1DP1-201ENST00000585891 896 ntBASIC15.85■□□□□ 0.13
ERCC4Q92889 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC4Q92889 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC15.85■□□□□ 0.13
ERCC4Q92889 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.85■□□□□ 0.13
ERCC4Q92889 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ERCC4Q92889 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms