Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 AC006529.1-201ENST00000459978 637 ntBASIC16.32■□□□□ 0.2
STAG1Q8WVM7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 EEF1GP8-201ENST00000506566 1154 ntBASIC16.32■□□□□ 0.2
STAG1Q8WVM7 IGHV3-37-201ENST00000518544 340 ntBASIC16.32■□□□□ 0.2
STAG1Q8WVM7 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 AC097376.2-205ENST00000610159 5334 ntBASIC16.32■□□□□ 0.2
STAG1Q8WVM7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.32■□□□□ 0.2
STAG1Q8WVM7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AC012362.1-201ENST00000434906 739 ntBASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AC005077.3-201ENST00000449614 213 ntBASIC16.31■□□□□ 0.2
STAG1Q8WVM7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.31■□□□□ 0.2
STAG1Q8WVM7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
STAG1Q8WVM7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms