Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PDIA3P1-201ENST00000471856 1510 ntBASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC107Q8WV48 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 PI4KAP2-201ENST00000360806 2080 ntBASIC12.15□□□□□ -0.46
CCDC107Q8WV48 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.15□□□□□ -0.46
CCDC107Q8WV48 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 AL358472.3-201ENST00000608147 415 ntBASIC12.15□□□□□ -0.46
CCDC107Q8WV48 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 PCDHB19P-202ENST00000625133 2914 ntBASIC12.15□□□□□ -0.46
CCDC107Q8WV48 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC107Q8WV48 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CCDC107Q8WV48 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CCDC107Q8WV48 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CCDC107Q8WV48 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CCDC107Q8WV48 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 CNN2P8-201ENST00000421872 913 ntBASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AC112492.5-201ENST00000421897 457 ntBASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AL161932.2-201ENST00000435436 679 ntBASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AL035414.1-201ENST00000451327 857 ntBASIC12.14□□□□□ -0.47
CCDC107Q8WV48 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC107Q8WV48 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms