Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GHET1-201ENST00000627071 1906 ntBASIC14.8□□□□□ -0.04
LMO3Q8TAP4 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO3Q8TAP4 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 OR2W2P-201ENST00000406313 909 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 OR52M2P-201ENST00000414298 959 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 GUSBP10-201ENST00000417412 665 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AL592076.1-201ENST00000424448 303 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AL132994.1-201ENST00000554098 400 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AC138894.2-201ENST00000602838 371 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AL009176.1-201ENST00000607876 650 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 AL021578.1-201ENST00000613646 709 ntBASIC14.79□□□□□ -0.04
LMO3Q8TAP4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO3Q8TAP4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 AC060814.4-201ENST00000594169 2163 ntBASIC14.78□□□□□ -0.04
LMO3Q8TAP4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 DLX4-206ENST00000611342 1662 ntBASIC14.78□□□□□ -0.04
LMO3Q8TAP4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 POM121L14P-201ENST00000406100 1558 ntBASIC14.78□□□□□ -0.04
LMO3Q8TAP4 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 CICP20-201ENST00000443330 2801 ntBASIC14.78□□□□□ -0.04
LMO3Q8TAP4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 HLA-DMA-203ENST00000395305 777 ntBASIC14.78□□□□□ -0.04
LMO3Q8TAP4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 AL627422.1-201ENST00000434104 580 ntBASIC14.78□□□□□ -0.04
LMO3Q8TAP4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.78□□□□□ -0.04
LMO3Q8TAP4 RN7SL81P-201ENST00000493781 261 ntBASIC14.78□□□□□ -0.04
LMO3Q8TAP4 IGLV3-15-201ENST00000518356 244 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms