Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD3Q7Z3D4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 AL627231.1-201ENST00000394467 1125 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 AC098934.1-203ENST00000442868 1262 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 EEF1DP6-201ENST00000449232 372 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 NDUFS6P1-201ENST00000485187 316 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 MIR4522-201ENST00000584932 87 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 AL353726.2-201ENST00000623259 884 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 TEKT4P2-202ENST00000559466 1312 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 AC004241.5-201ENST00000623870 2448 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 TBC1D27-202ENST00000424239 1573 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SALL4P6-201ENST00000429385 1691 ntBASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD3Q7Z3D4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 AC131212.3-201ENST00000624087 4219 ntBASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD3Q7Z3D4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms