Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 CHCHD2P9-201ENST00000461726 456 ntBASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 RN7SL767P-201ENST00000493013 295 ntBASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 RN7SL564P-201ENST00000496309 250 ntBASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 OR5BD1P-201ENST00000532527 817 ntBASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 KRT8P2-201ENST00000556193 944 ntBASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 AP001184.1-201ENST00000637936 376 ntBASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 AL355102.3-201ENST00000554299 1678 ntBASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRICKLE4Q2TBC4 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AL512430.1-201ENST00000392575 860 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 HLA-DMA-203ENST00000395305 777 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 OR2W2P-201ENST00000406313 909 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 GUSBP10-201ENST00000417412 665 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 SNORD3B-1-201ENST00000577988 758 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AC138894.2-201ENST00000602838 371 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AC012073.1-201ENST00000606114 1108 ntBASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRICKLE4Q2TBC4 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms