Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 AC073869.1-201ENST00000415574 2762 ntBASIC12.38□□□□□ -0.43
LHX2P50458 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 AL359183.1-201ENST00000623796 2132 ntBASIC12.37□□□□□ -0.43
LHX2P50458 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.37□□□□□ -0.43
LHX2P50458 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.37□□□□□ -0.43
LHX2P50458 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.37□□□□□ -0.43
LHX2P50458 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.37□□□□□ -0.43
LHX2P50458 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.37□□□□□ -0.43
LHX2P50458 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.37□□□□□ -0.43
LHX2P50458 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 MIR8071-1-201ENST00000616769 65 ntBASIC12.37□□□□□ -0.43
LHX2P50458 MIR8071-2-201ENST00000616772 65 ntBASIC12.37□□□□□ -0.43
LHX2P50458 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.37□□□□□ -0.43
LHX2P50458 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.37□□□□□ -0.43
LHX2P50458 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LHX2P50458 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LHX2P50458 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LHX2P50458 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LHX2P50458 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 AC020917.4-201ENST00000623994 1999 ntBASIC12.36□□□□□ -0.43
LHX2P50458 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.36□□□□□ -0.43
LHX2P50458 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LHX2P50458 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.36□□□□□ -0.43
LHX2P50458 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.36□□□□□ -0.43
LHX2P50458 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms