Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 AC092028.1-202ENST00000641483 3547 ntBASIC10.74□□□□□ -0.69
RAB4AP20338 AC092028.1-201ENST00000641781 3540 ntBASIC10.74□□□□□ -0.69
RAB4AP20338 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB4AP20338 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB4AP20338 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB4AP20338 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 C8orf17-202ENST00000625034 2775 ntBASIC10.73□□□□□ -0.69
RAB4AP20338 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RAB4AP20338 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB4AP20338 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
RAB4AP20338 AL353779.1-201ENST00000434793 351 ntBASIC10.73□□□□□ -0.69
RAB4AP20338 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
RAB4AP20338 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RAB4AP20338 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB4AP20338 MIR4453-201ENST00000584019 89 ntBASIC10.73□□□□□ -0.69
RAB4AP20338 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB4AP20338 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RAB4AP20338 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 AC012676.5-201ENST00000624337 1955 ntBASIC10.73□□□□□ -0.69
RAB4AP20338 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 TUBB8P4-201ENST00000511806 1324 ntBASIC10.73□□□□□ -0.69
RAB4AP20338 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 AC006037.2-201ENST00000622975 2232 ntBASIC10.73□□□□□ -0.69
RAB4AP20338 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 AL359845.1-201ENST00000458202 1648 ntBASIC10.73□□□□□ -0.69
RAB4AP20338 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB4AP20338 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB4AP20338 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB4AP20338 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
RAB4AP20338 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB4AP20338 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB4AP20338 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms