Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.43□□□□□ -0.1
CD48P09326 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.43□□□□□ -0.1
CD48P09326 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.43□□□□□ -0.1
CD48P09326 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 OR2K2-202ENST00000374428 1038 ntBASIC14.43□□□□□ -0.1
CD48P09326 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.43□□□□□ -0.1
CD48P09326 AL008707.1-201ENST00000422498 534 ntBASIC14.43□□□□□ -0.1
CD48P09326 AC005722.1-201ENST00000431878 964 ntBASIC14.43□□□□□ -0.1
CD48P09326 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.43□□□□□ -0.1
CD48P09326 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.43□□□□□ -0.1
CD48P09326 AC024681.1-201ENST00000521917 487 ntBASIC14.43□□□□□ -0.1
CD48P09326 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CD48P09326 AC026803.1-201ENST00000569130 274 ntBASIC14.43□□□□□ -0.1
CD48P09326 AC244093.1-201ENST00000610837 814 ntBASIC14.43□□□□□ -0.1
CD48P09326 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.43□□□□□ -0.1
CD48P09326 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.43□□□□□ -0.1
CD48P09326 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.43□□□□□ -0.1
CD48P09326 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.43□□□□□ -0.1
CD48P09326 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.43□□□□□ -0.1
CD48P09326 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 AL358781.1-202ENST00000321081 1360 ntBASIC14.43□□□□□ -0.1
CD48P09326 AC020907.1-201ENST00000616460 1350 ntBASIC14.43□□□□□ -0.1
CD48P09326 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CD48P09326 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 MKRN5P-201ENST00000445263 1467 ntBASIC14.43□□□□□ -0.1
CD48P09326 RCC2P5-201ENST00000492126 1487 ntBASIC14.43□□□□□ -0.1
CD48P09326 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.43□□□□□ -0.1
CD48P09326 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CD48P09326 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.43□□□□□ -0.1
CD48P09326 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.43□□□□□ -0.1
CD48P09326 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD48P09326 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CD48P09326 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 AP003969.2-201ENST00000623739 2275 ntBASIC14.42□□□□□ -0.1
CD48P09326 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.42□□□□□ -0.1
CD48P09326 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.42□□□□□ -0.1
CD48P09326 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.42□□□□□ -0.1
CD48P09326 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.42□□□□□ -0.1
CD48P09326 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.42□□□□□ -0.1
CD48P09326 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.42□□□□□ -0.1
CD48P09326 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CD48P09326 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.42□□□□□ -0.1
CD48P09326 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.42□□□□□ -0.1
CD48P09326 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CD48P09326 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.42□□□□□ -0.1
CD48P09326 AL356740.1-201ENST00000602192 1297 ntBASIC14.42□□□□□ -0.1
CD48P09326 AF254983.2-201ENST00000612331 135 ntBASIC14.42□□□□□ -0.1
CD48P09326 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.42□□□□□ -0.1
CD48P09326 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CD48P09326 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
CD48P09326 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.42□□□□□ -0.1
CD48P09326 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 AC040160.2-201ENST00000623816 1675 ntBASIC14.42□□□□□ -0.1
CD48P09326 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD48P09326 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.42□□□□□ -0.1
CD48P09326 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 AC138761.6-201ENST00000583997 1423 ntBASIC14.41□□□□□ -0.1
CD48P09326 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CD48P09326 AP002761.4-201ENST00000565433 3361 ntBASIC14.41□□□□□ -0.1
CD48P09326 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CD48P09326 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CD48P09326 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.41□□□□□ -0.1
CD48P09326 PPP1R2P4-201ENST00000424051 595 ntBASIC14.41□□□□□ -0.1
CD48P09326 AC026320.2-201ENST00000434379 478 ntBASIC14.41□□□□□ -0.1
CD48P09326 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 AC005077.2-201ENST00000449786 690 ntBASIC14.41□□□□□ -0.1
CD48P09326 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.41□□□□□ -0.1
CD48P09326 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD48P09326 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.41□□□□□ -0.1
CD48P09326 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms