Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.05□□□□□ -0.16
RETP07949 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.05□□□□□ -0.16
RETP07949 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.05□□□□□ -0.16
RETP07949 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RETP07949 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.05□□□□□ -0.16
RETP07949 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.05□□□□□ -0.16
RETP07949 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.05□□□□□ -0.16
RETP07949 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RETP07949 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.05□□□□□ -0.16
RETP07949 AL021707.6-201ENST00000609212 491 ntBASIC14.05□□□□□ -0.16
RETP07949 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.05□□□□□ -0.16
RETP07949 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.05□□□□□ -0.16
RETP07949 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.05□□□□□ -0.16
RETP07949 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.05□□□□□ -0.16
RETP07949 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.05□□□□□ -0.16
RETP07949 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.05□□□□□ -0.16
RETP07949 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.05□□□□□ -0.16
RETP07949 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
RETP07949 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
RETP07949 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.05□□□□□ -0.16
RETP07949 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.05□□□□□ -0.16
RETP07949 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.05□□□□□ -0.16
RETP07949 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RETP07949 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RETP07949 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RETP07949 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 AC079781.5-202ENST00000641784 3743 ntBASIC14.04□□□□□ -0.16
RETP07949 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RETP07949 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RETP07949 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RETP07949 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RETP07949 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RETP07949 AP000244.1-201ENST00000424582 201 ntBASIC14.04□□□□□ -0.16
RETP07949 KRT8P30-201ENST00000432100 650 ntBASIC14.04□□□□□ -0.16
RETP07949 NRADDP-201ENST00000437305 691 ntBASIC14.04□□□□□ -0.16
RETP07949 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.04□□□□□ -0.16
RETP07949 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.04□□□□□ -0.16
RETP07949 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.04□□□□□ -0.16
RETP07949 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.04□□□□□ -0.16
RETP07949 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.04□□□□□ -0.16
RETP07949 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.04□□□□□ -0.16
RETP07949 AC023968.2-201ENST00000560593 1049 ntBASIC14.04□□□□□ -0.16
RETP07949 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.04□□□□□ -0.16
RETP07949 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 TCAF1P1-201ENST00000414990 2232 ntBASIC14.04□□□□□ -0.16
RETP07949 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 AC012617.1-204ENST00000586340 2305 ntBASIC14.04□□□□□ -0.16
RETP07949 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RETP07949 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 AC130686.1-201ENST00000622936 2466 ntBASIC14.04□□□□□ -0.16
RETP07949 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RETP07949 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.04□□□□□ -0.16
RETP07949 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms