Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSF1RP07333 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
CSF1RP07333 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSF1RP07333 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.82■□□□□ 0.28
CSF1RP07333 AL359881.3-201ENST00000602640 1721 ntBASIC16.82■□□□□ 0.28
CSF1RP07333 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.82■□□□□ 0.28
CSF1RP07333 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSF1RP07333 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.81■□□□□ 0.28
CSF1RP07333 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC16.81■□□□□ 0.28
CSF1RP07333 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.81■□□□□ 0.28
CSF1RP07333 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CSF1RP07333 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.81■□□□□ 0.28
CSF1RP07333 AP000437.1-201ENST00000624057 2085 ntBASIC16.81■□□□□ 0.28
CSF1RP07333 AL358781.1-202ENST00000321081 1360 ntBASIC16.81■□□□□ 0.28
CSF1RP07333 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CSF1RP07333 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 SDCBP2P1-201ENST00000416115 614 ntBASIC16.81■□□□□ 0.28
CSF1RP07333 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC16.81■□□□□ 0.28
CSF1RP07333 AC012158.2-201ENST00000536546 354 ntBASIC16.81■□□□□ 0.28
CSF1RP07333 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC16.81■□□□□ 0.28
CSF1RP07333 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC16.81■□□□□ 0.28
CSF1RP07333 MIR4746-201ENST00000579802 71 ntBASIC16.81■□□□□ 0.28
CSF1RP07333 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.81■□□□□ 0.28
CSF1RP07333 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.81■□□□□ 0.28
CSF1RP07333 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.81■□□□□ 0.28
CSF1RP07333 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSF1RP07333 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSF1RP07333 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSF1RP07333 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSF1RP07333 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.8■□□□□ 0.28
CSF1RP07333 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 IFNWP2-201ENST00000431203 580 ntBASIC16.8■□□□□ 0.28
CSF1RP07333 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 AC092896.1-201ENST00000465850 380 ntBASIC16.8■□□□□ 0.28
CSF1RP07333 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.8■□□□□ 0.28
CSF1RP07333 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 AP000920.1-201ENST00000531824 344 ntBASIC16.8■□□□□ 0.28
CSF1RP07333 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC16.8■□□□□ 0.28
CSF1RP07333 PHBP18-201ENST00000546648 813 ntBASIC16.8■□□□□ 0.28
CSF1RP07333 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.8■□□□□ 0.28
CSF1RP07333 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC16.8■□□□□ 0.28
CSF1RP07333 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC16.8■□□□□ 0.28
CSF1RP07333 AP000553.2-201ENST00000609038 441 ntBASIC16.8■□□□□ 0.28
CSF1RP07333 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.8■□□□□ 0.28
CSF1RP07333 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSF1RP07333 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSF1RP07333 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSF1RP07333 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSF1RP07333 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.79■□□□□ 0.28
CSF1RP07333 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSF1RP07333 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.79■□□□□ 0.28
CSF1RP07333 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC16.79■□□□□ 0.28
CSF1RP07333 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CSF1RP07333 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.79■□□□□ 0.28
CSF1RP07333 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.79■□□□□ 0.28
CSF1RP07333 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSF1RP07333 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSF1RP07333 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.79■□□□□ 0.28
CSF1RP07333 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.79■□□□□ 0.28
CSF1RP07333 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSF1RP07333 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.79■□□□□ 0.28
CSF1RP07333 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms