Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 ASS1P2-201ENST00000439895 1223 ntBASIC15.16■□□□□ 0.02
VTNP04004 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 AC092903.1-201ENST00000466506 262 ntBASIC15.16■□□□□ 0.02
VTNP04004 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.16■□□□□ 0.02
VTNP04004 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.16■□□□□ 0.02
VTNP04004 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.16■□□□□ 0.02
VTNP04004 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VTNP04004 FAM45BP-202ENST00000592932 1624 ntBASIC15.16■□□□□ 0.02
VTNP04004 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.16■□□□□ 0.02
VTNP04004 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VTNP04004 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VTNP04004 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.16■□□□□ 0.02
VTNP04004 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VTNP04004 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VTNP04004 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.16■□□□□ 0.02
VTNP04004 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.15■□□□□ 0.02
VTNP04004 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 AF013593.1-201ENST00000458074 1487 ntBASIC15.15■□□□□ 0.02
VTNP04004 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VTNP04004 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.15■□□□□ 0.02
VTNP04004 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 MIR1227-201ENST00000408484 88 ntBASIC15.15■□□□□ 0.02
VTNP04004 AC041040.1-201ENST00000425197 460 ntBASIC15.15■□□□□ 0.02
VTNP04004 AL512599.1-201ENST00000430724 685 ntBASIC15.15■□□□□ 0.02
VTNP04004 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.15■□□□□ 0.02
VTNP04004 AC079250.1-201ENST00000456046 531 ntBASIC15.15■□□□□ 0.02
VTNP04004 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.15■□□□□ 0.02
VTNP04004 AC010234.1-201ENST00000494599 870 ntBASIC15.15■□□□□ 0.02
VTNP04004 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.15■□□□□ 0.02
VTNP04004 FAM86B3P-203ENST00000523992 854 ntBASIC15.15■□□□□ 0.02
VTNP04004 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.15■□□□□ 0.02
VTNP04004 MIR3940-201ENST00000579148 102 ntBASIC15.15■□□□□ 0.02
VTNP04004 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.15■□□□□ 0.02
VTNP04004 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VTNP04004 AL928921.2-201ENST00000641325 2442 ntBASIC15.15■□□□□ 0.02
VTNP04004 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.15■□□□□ 0.02
VTNP04004 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VTNP04004 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.15■□□□□ 0.02
VTNP04004 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.15■□□□□ 0.02
VTNP04004 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
VTNP04004 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 SALL4P6-201ENST00000429385 1691 ntBASIC15.14■□□□□ 0.01
VTNP04004 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VTNP04004 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VTNP04004 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.14■□□□□ 0.01
VTNP04004 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 AL022344.2-201ENST00000568976 968 ntBASIC15.14■□□□□ 0.01
VTNP04004 AC005777.1-201ENST00000588332 187 ntBASIC15.14■□□□□ 0.01
VTNP04004 AC005357.2-202ENST00000590507 1060 ntBASIC15.14■□□□□ 0.01
VTNP04004 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VTNP04004 AL160191.2-201ENST00000603975 601 ntBASIC15.14■□□□□ 0.01
VTNP04004 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms