Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 AC138761.6-201ENST00000583997 1423 ntBASIC10.78□□□□□ -0.68
TRBV12-3P01733 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 AL512430.1-201ENST00000392575 860 ntBASIC10.78□□□□□ -0.68
TRBV12-3P01733 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 MRPL22P1-201ENST00000505398 616 ntBASIC10.78□□□□□ -0.68
TRBV12-3P01733 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 NEU3-205ENST00000531619 582 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 RHOQP1-201ENST00000555758 579 ntBASIC10.78□□□□□ -0.68
TRBV12-3P01733 AC145285.5-201ENST00000562217 361 ntBASIC10.78□□□□□ -0.68
TRBV12-3P01733 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 CR383656.2-201ENST00000548656 2254 ntBASIC10.78□□□□□ -0.68
TRBV12-3P01733 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 MARK2P9-201ENST00000430958 1727 ntBASIC10.78□□□□□ -0.68
TRBV12-3P01733 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.78□□□□□ -0.68
TRBV12-3P01733 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TRBV12-3P01733 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
TRBV12-3P01733 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC10.77□□□□□ -0.68
TRBV12-3P01733 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
TRBV12-3P01733 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
TRBV12-3P01733 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TRBV12-3P01733 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
TRBV12-3P01733 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
TRBV12-3P01733 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
TRBV12-3P01733 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
TRBV12-3P01733 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
TRBV12-3P01733 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC10.77□□□□□ -0.68
TRBV12-3P01733 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AC020763.3-201ENST00000625095 2904 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 DMBT1P1-203ENST00000636837 4628 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 PYY2-201ENST00000315776 282 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 UFM1-202ENST00000379649 846 ntTSL 4 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AP000356.3-201ENST00000382243 753 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 RPL3P2-204ENST00000413027 1203 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 AC005722.1-201ENST00000431878 964 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 FGFR3P1-201ENST00000449999 601 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 CD81-209ENST00000492627 886 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 AC019193.1-201ENST00000506678 823 ntBASIC10.77□□□□□ -0.69
TRBV12-3P01733 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC10.77□□□□□ -0.69
TRBV12-3P01733 NAA40-205ENST00000539656 577 ntTSL 4 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms