Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 AC006453.4-201ENST00000636949 1252 ntBASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC9.46□□□□□ -0.9
SMIM1B2RUZ4 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC244394.1-201ENST00000435000 1665 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC012531.1-201ENST00000562848 2680 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 CICP9-201ENST00000444451 1913 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 FAM197Y7-201ENST00000432892 766 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC002472.2-201ENST00000442739 958 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 CHMP1AP1-201ENST00000445563 662 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AP001889.1-201ENST00000525414 633 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC003686.1-201ENST00000550956 1034 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC140912.1-201ENST00000577171 1054 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 RPL13AP3-202ENST00000494676 1473 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 IL9RP3-201ENST00000442856 1674 ntBASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
SMIM1B2RUZ4 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM1B2RUZ4 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM1B2RUZ4 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM1B2RUZ4 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM1B2RUZ4 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms