Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.21□□□□□ -0.13
CCDC78A2IDD5 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 AC004898.1-201ENST00000451057 766 ntBASIC14.21□□□□□ -0.13
CCDC78A2IDD5 AC125604.1-201ENST00000496255 707 ntBASIC14.21□□□□□ -0.13
CCDC78A2IDD5 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 ALG1L13P-202ENST00000519320 584 ntBASIC14.21□□□□□ -0.13
CCDC78A2IDD5 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 AC093752.3-201ENST00000567343 901 ntBASIC14.21□□□□□ -0.13
CCDC78A2IDD5 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC78A2IDD5 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCDC78A2IDD5 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CCDC78A2IDD5 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC78A2IDD5 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC78A2IDD5 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 TNRC18P1-201ENST00000502875 3650 ntBASIC14.2□□□□□ -0.14
CCDC78A2IDD5 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 RN7SL530P-201ENST00000485097 298 ntBASIC14.2□□□□□ -0.14
CCDC78A2IDD5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 AC026740.1-201ENST00000607068 791 ntBASIC14.2□□□□□ -0.14
CCDC78A2IDD5 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 MARK2P9-201ENST00000430958 1727 ntBASIC14.2□□□□□ -0.14
CCDC78A2IDD5 FP325330.2-201ENST00000624219 5630 ntBASIC14.2□□□□□ -0.14
CCDC78A2IDD5 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC78A2IDD5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 FMO6P-201ENST00000236166 1620 ntBASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC78A2IDD5 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms