Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.32□□□□□ -0.28
CGREF1Q99674 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CGREF1Q99674 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.32□□□□□ -0.28
CGREF1Q99674 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.32□□□□□ -0.28
CGREF1Q99674 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 POM121L10P-201ENST00000436994 1285 ntBASIC13.32□□□□□ -0.28
CGREF1Q99674 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 KRT17P7-201ENST00000451704 1104 ntBASIC13.32□□□□□ -0.28
CGREF1Q99674 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.32□□□□□ -0.28
CGREF1Q99674 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.32□□□□□ -0.28
CGREF1Q99674 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.32□□□□□ -0.28
CGREF1Q99674 AL162426.1-201ENST00000624141 743 ntBASIC13.32□□□□□ -0.28
CGREF1Q99674 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.32□□□□□ -0.28
CGREF1Q99674 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.32□□□□□ -0.28
CGREF1Q99674 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CGREF1Q99674 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CGREF1Q99674 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CGREF1Q99674 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
CGREF1Q99674 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AC107375.1-201ENST00000564464 2231 ntBASIC13.31□□□□□ -0.28
CGREF1Q99674 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.31□□□□□ -0.28
CGREF1Q99674 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CGREF1Q99674 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CGREF1Q99674 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.31□□□□□ -0.28
CGREF1Q99674 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 AL161773.1-201ENST00000624845 863 ntBASIC13.31□□□□□ -0.28
CGREF1Q99674 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.31□□□□□ -0.28
CGREF1Q99674 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.31□□□□□ -0.28
CGREF1Q99674 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.31□□□□□ -0.28
CGREF1Q99674 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CGREF1Q99674 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CGREF1Q99674 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.3□□□□□ -0.28
CGREF1Q99674 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.3□□□□□ -0.28
CGREF1Q99674 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CGREF1Q99674 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CGREF1Q99674 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CGREF1Q99674 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.3□□□□□ -0.28
CGREF1Q99674 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.3□□□□□ -0.28
CGREF1Q99674 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CGREF1Q99674 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms