Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 Z98257.2-202ENST00000641138 1548 ntBASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHAMP1Q96JM3 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 RN7SL277P-201ENST00000481521 288 ntBASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AC008805.1-201ENST00000590892 364 ntBASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AC009884.2-201ENST00000603110 324 ntBASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 AC244093.1-201ENST00000610837 814 ntBASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 PCDHA5-203ENST00000614258 4248 ntBASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHAMP1Q96JM3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AC087386.2-201ENST00000623212 4637 ntBASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 XBP1P1-201ENST00000436573 652 ntBASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AC012441.2-201ENST00000444843 739 ntBASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHAMP1Q96JM3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms