Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 PPP1R2P4-201ENST00000424051 595 ntBASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 MIR4522-201ENST00000584932 87 ntBASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 AC009560.1-201ENST00000620208 434 ntBASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
LPCAT1Q8NF37 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 AC005252.3-201ENST00000623855 2258 ntBASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.08□□□□□ -0.15
LPCAT1Q8NF37 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 LINC00265-2P-201ENST00000413372 782 ntBASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 RN7SL788P-201ENST00000460504 316 ntBASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 AL031673.1-201ENST00000611460 466 ntBASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.08□□□□□ -0.16
LPCAT1Q8NF37 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 AC138761.6-201ENST00000583997 1423 ntBASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 MARK2P9-201ENST00000430958 1727 ntBASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.07□□□□□ -0.16
LPCAT1Q8NF37 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms