Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AC124319.4-201ENST00000622931 2161 ntBASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AL645937.6-201ENST00000641122 3727 ntBASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 ANKRD19P-201ENST00000338192 862 ntBASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AL035414.1-201ENST00000451327 857 ntBASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AP003171.2-201ENST00000528208 925 ntBASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AP006547.1-201ENST00000563435 692 ntBASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM53Q6P2H8 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 AC024075.2-201ENST00000598112 1473 ntBASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 AC009093.2-202ENST00000620513 2079 ntBASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM53Q6P2H8 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms