Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.28□□□□□ -0.28
SKP1P63208 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.28□□□□□ -0.28
SKP1P63208 AC026316.1-201ENST00000398900 414 ntBASIC13.28□□□□□ -0.28
SKP1P63208 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.28□□□□□ -0.28
SKP1P63208 AL627422.1-201ENST00000434104 580 ntBASIC13.28□□□□□ -0.28
SKP1P63208 SCARNA12-201ENST00000459155 270 ntBASIC13.28□□□□□ -0.28
SKP1P63208 RN7SL788P-201ENST00000460504 316 ntBASIC13.28□□□□□ -0.28
SKP1P63208 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 AC130709.1-201ENST00000484779 1212 ntBASIC13.28□□□□□ -0.28
SKP1P63208 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.28□□□□□ -0.28
SKP1P63208 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 OR5BD1P-201ENST00000532527 817 ntBASIC13.28□□□□□ -0.28
SKP1P63208 AC105129.2-201ENST00000559536 390 ntBASIC13.28□□□□□ -0.28
SKP1P63208 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.28□□□□□ -0.28
SKP1P63208 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
SKP1P63208 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 AC092123.2-201ENST00000611189 5421 ntBASIC13.28□□□□□ -0.28
SKP1P63208 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.28□□□□□ -0.28
SKP1P63208 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 AL928921.2-201ENST00000641325 2442 ntBASIC13.28□□□□□ -0.28
SKP1P63208 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.28□□□□□ -0.28
SKP1P63208 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SKP1P63208 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SKP1P63208 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SKP1P63208 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.27□□□□□ -0.28
SKP1P63208 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.27□□□□□ -0.28
SKP1P63208 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SKP1P63208 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.27□□□□□ -0.28
SKP1P63208 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SKP1P63208 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SKP1P63208 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.27□□□□□ -0.28
SKP1P63208 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SKP1P63208 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SKP1P63208 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.27□□□□□ -0.28
SKP1P63208 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.27□□□□□ -0.28
SKP1P63208 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.27□□□□□ -0.28
SKP1P63208 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SKP1P63208 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SKP1P63208 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SKP1P63208 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.27□□□□□ -0.28
SKP1P63208 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.27□□□□□ -0.29
SKP1P63208 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.27□□□□□ -0.29
SKP1P63208 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SKP1P63208 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms