Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA4P51532 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SMARCA4P51532 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA4P51532 HNRNPA1P59-201ENST00000430583 918 ntBASIC23.79■■□□□ 1.4
SMARCA4P51532 AL929472.4-201ENST00000447422 691 ntBASIC23.79■■□□□ 1.4
SMARCA4P51532 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA4P51532 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC23.79■■□□□ 1.4
SMARCA4P51532 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA4P51532 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SMARCA4P51532 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC23.79■■□□□ 1.4
SMARCA4P51532 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 OR4C3-202ENST00000611380 597 ntBASIC23.79■■□□□ 1.4
SMARCA4P51532 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA4P51532 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SMARCA4P51532 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA4P51532 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA4P51532 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SMARCA4P51532 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA4P51532 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA4P51532 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA4P51532 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SMARCA4P51532 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 AC000078.1-201ENST00000420617 682 ntBASIC23.78■■□□□ 1.4
SMARCA4P51532 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC23.78■■□□□ 1.4
SMARCA4P51532 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 MANEA-AS1-201ENST00000564541 2268 ntBASIC23.78■■□□□ 1.4
SMARCA4P51532 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
SMARCA4P51532 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCA4P51532 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC23.78■■□□□ 1.4
SMARCA4P51532 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC23.78■■□□□ 1.4
SMARCA4P51532 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCA4P51532 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SMARCA4P51532 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SMARCA4P51532 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCA4P51532 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA4P51532 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCA4P51532 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCA4P51532 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
SMARCA4P51532 ATP5G1P7-201ENST00000444398 400 ntBASIC23.77■■□□□ 1.4
SMARCA4P51532 IGHV3OR16-11-201ENST00000565524 349 ntBASIC23.77■■□□□ 1.4
SMARCA4P51532 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCA4P51532 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SMARCA4P51532 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCA4P51532 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA4P51532 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCA4P51532 AC244154.1-201ENST00000620148 1555 ntBASIC23.77■■□□□ 1.4
SMARCA4P51532 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
SMARCA4P51532 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCA4P51532 AC004884.1-201ENST00000393647 319 ntBASIC23.77■■□□□ 1.4
SMARCA4P51532 AL049792.1-201ENST00000424708 1262 ntBASIC23.77■■□□□ 1.4
SMARCA4P51532 IGHV7-56-201ENST00000518372 351 ntBASIC23.77■■□□□ 1.4
SMARCA4P51532 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCA4P51532 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC23.77■■□□□ 1.4
SMARCA4P51532 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
SMARCA4P51532 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SMARCA4P51532 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC23.77■■□□□ 1.39
SMARCA4P51532 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.39
SMARCA4P51532 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA4P51532 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SMARCA4P51532 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA4P51532 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA4P51532 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA4P51532 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA4P51532 AC005549.1-201ENST00000579438 1629 ntBASIC23.76■■□□□ 1.39
SMARCA4P51532 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
SMARCA4P51532 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA4P51532 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC23.76■■□□□ 1.39
SMARCA4P51532 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA4P51532 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms