Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC1A1P43005 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 TUBB2BP1-201ENST00000404155 871 ntBASIC14.6□□□□□ -0.07
SLC1A1P43005 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC1A1P43005 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC1A1P43005 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC1A1P43005 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 AC044849.1-201ENST00000519737 1188 ntBASIC14.6□□□□□ -0.07
SLC1A1P43005 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.6□□□□□ -0.07
SLC1A1P43005 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC1A1P43005 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.6□□□□□ -0.07
SLC1A1P43005 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC1A1P43005 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.6□□□□□ -0.07
SLC1A1P43005 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC1A1P43005 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
SLC1A1P43005 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC1A1P43005 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 AC104758.3-203ENST00000562938 2123 ntBASIC14.59□□□□□ -0.07
SLC1A1P43005 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.59□□□□□ -0.07
SLC1A1P43005 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.59□□□□□ -0.07
SLC1A1P43005 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.59□□□□□ -0.07
SLC1A1P43005 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 ALG1L13P-202ENST00000519320 584 ntBASIC14.59□□□□□ -0.07
SLC1A1P43005 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SLC1A1P43005 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 NAP1L6-202ENST00000641404 1222 ntBASIC14.59□□□□□ -0.07
SLC1A1P43005 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SLC1A1P43005 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC1A1P43005 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC1A1P43005 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms