Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
NELFEP18615 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NELFEP18615 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.91□□□□□ -0.18
NELFEP18615 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.91□□□□□ -0.18
NELFEP18615 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NELFEP18615 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.91□□□□□ -0.18
NELFEP18615 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NELFEP18615 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NELFEP18615 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 LINC01165-201ENST00000445190 1623 ntBASIC13.9□□□□□ -0.18
NELFEP18615 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.9□□□□□ -0.18
NELFEP18615 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.9□□□□□ -0.18
NELFEP18615 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.9□□□□□ -0.18
NELFEP18615 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 HINT2P1-201ENST00000419438 481 ntBASIC13.9□□□□□ -0.18
NELFEP18615 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.9□□□□□ -0.18
NELFEP18615 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.9□□□□□ -0.18
NELFEP18615 ST13P19-201ENST00000442505 1124 ntBASIC13.9□□□□□ -0.18
NELFEP18615 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.9□□□□□ -0.18
NELFEP18615 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.9□□□□□ -0.18
NELFEP18615 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.9□□□□□ -0.18
NELFEP18615 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.9□□□□□ -0.18
NELFEP18615 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
NELFEP18615 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 MEG3_2.1-201ENST00000611456 105 ntBASIC13.9□□□□□ -0.18
NELFEP18615 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NELFEP18615 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.9□□□□□ -0.18
NELFEP18615 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NELFEP18615 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.9□□□□□ -0.19
NELFEP18615 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.9□□□□□ -0.19
NELFEP18615 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NELFEP18615 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NELFEP18615 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NELFEP18615 TBC1D3J-201ENST00000620719 1426 ntBASIC13.9□□□□□ -0.19
NELFEP18615 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NELFEP18615 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
NELFEP18615 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.89□□□□□ -0.19
NELFEP18615 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 FAM90A2P-201ENST00000511144 1395 ntBASIC13.89□□□□□ -0.19
NELFEP18615 FAM90A25P-201ENST00000528404 1395 ntBASIC13.89□□□□□ -0.19
NELFEP18615 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
NELFEP18615 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 AC091046.1-201ENST00000331871 207 ntBASIC13.89□□□□□ -0.19
NELFEP18615 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NELFEP18615 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.89□□□□□ -0.19
NELFEP18615 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.89□□□□□ -0.19
NELFEP18615 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NELFEP18615 FTLP1-201ENST00000449155 526 ntBASIC13.89□□□□□ -0.19
NELFEP18615 AC008723.1-201ENST00000506922 207 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 355.7 ms