Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCL2P13500 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL2P13500 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL2P13500 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL2P13500 AC079781.5-202ENST00000641784 3743 ntBASIC12.2□□□□□ -0.46
CCL2P13500 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 LINC00638-201ENST00000555578 2518 ntBASIC12.19□□□□□ -0.46
CCL2P13500 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCL2P13500 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.19□□□□□ -0.46
CCL2P13500 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 MIR557-201ENST00000385239 98 ntBASIC12.19□□□□□ -0.46
CCL2P13500 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 CEP164P1-201ENST00000455142 418 ntBASIC12.19□□□□□ -0.46
CCL2P13500 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 KLF17P1-201ENST00000547105 1126 ntBASIC12.19□□□□□ -0.46
CCL2P13500 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.19□□□□□ -0.46
CCL2P13500 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.19□□□□□ -0.46
CCL2P13500 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 CR392039.2-201ENST00000623182 509 ntBASIC12.19□□□□□ -0.46
CCL2P13500 AC006453.1-201ENST00000636037 1257 ntBASIC12.19□□□□□ -0.46
CCL2P13500 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.19□□□□□ -0.46
CCL2P13500 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL2P13500 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 KRT8P18-201ENST00000413425 1445 ntBASIC12.19□□□□□ -0.46
CCL2P13500 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL2P13500 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL2P13500 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL2P13500 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL2P13500 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL2P13500 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL2P13500 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CCL2P13500 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms