Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.75□□□□□ -0.37
HTR1AP08908 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.75□□□□□ -0.37
HTR1AP08908 CICP9-201ENST00000444451 1913 ntBASIC12.75□□□□□ -0.37
HTR1AP08908 AC012441.1-201ENST00000446669 685 ntBASIC12.75□□□□□ -0.37
HTR1AP08908 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR1AP08908 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HTR1AP08908 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HTR1AP08908 SERBP1P5-201ENST00000510079 1181 ntBASIC12.75□□□□□ -0.37
HTR1AP08908 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR1AP08908 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HTR1AP08908 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.75□□□□□ -0.37
HTR1AP08908 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.75□□□□□ -0.37
HTR1AP08908 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR1AP08908 AL512310.5-201ENST00000551999 515 ntBASIC12.75□□□□□ -0.37
HTR1AP08908 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR1AP08908 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.75□□□□□ -0.37
HTR1AP08908 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.75□□□□□ -0.37
HTR1AP08908 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HTR1AP08908 WFDC1-204ENST00000613603 549 ntBASIC12.75□□□□□ -0.37
HTR1AP08908 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HTR1AP08908 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.75□□□□□ -0.37
HTR1AP08908 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HTR1AP08908 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HTR1AP08908 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
HTR1AP08908 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HTR1AP08908 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR1AP08908 CCT8L1P-201ENST00000465400 1674 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
HTR1AP08908 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 REXO1L6P-201ENST00000603433 1515 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 LAP3P2-201ENST00000454686 1454 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR1AP08908 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HTR1AP08908 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 BAATP1-201ENST00000412284 1225 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 HMGA1P1-201ENST00000415560 1062 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 AL035414.1-201ENST00000451327 857 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 CICP12-201ENST00000455801 843 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 AC106820.3-201ENST00000561653 397 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.74□□□□□ -0.37
HTR1AP08908 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 CTBP2P3-201ENST00000585629 1255 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HTR1AP08908 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR1AP08908 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.74□□□□□ -0.37
HTR1AP08908 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR1AP08908 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HTR1AP08908 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.74□□□□□ -0.37
HTR1AP08908 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR1AP08908 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR1AP08908 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.74□□□□□ -0.37
HTR1AP08908 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.74□□□□□ -0.37
HTR1AP08908 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 GUCY2EP-203ENST00000531117 1918 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HTR1AP08908 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HTR1AP08908 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.74□□□□□ -0.37
HTR1AP08908 MSTO2P-201ENST00000314835 1709 ntBASIC12.74□□□□□ -0.37
HTR1AP08908 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
HTR1AP08908 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.73□□□□□ -0.37
HTR1AP08908 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HTR1AP08908 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.73□□□□□ -0.37
HTR1AP08908 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HTR1AP08908 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms