Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSN3P07498 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSN3P07498 AC138028.6-201ENST00000616106 1482 ntBASIC11.12□□□□□ -0.63
CSN3P07498 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSN3P07498 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CSN3P07498 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.12□□□□□ -0.63
CSN3P07498 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSN3P07498 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSN3P07498 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CSN3P07498 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSN3P07498 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSN3P07498 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CSN3P07498 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.11□□□□□ -0.63
CSN3P07498 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 FNTAP2-201ENST00000430308 634 ntBASIC11.11□□□□□ -0.63
CSN3P07498 VDAC1P1-201ENST00000439229 848 ntBASIC11.11□□□□□ -0.63
CSN3P07498 AC022494.1-201ENST00000466044 728 ntBASIC11.11□□□□□ -0.63
CSN3P07498 HLA-J-204ENST00000495278 958 ntBASIC11.11□□□□□ -0.63
CSN3P07498 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.11□□□□□ -0.63
CSN3P07498 SCARNA21-201ENST00000517026 139 ntBASIC11.11□□□□□ -0.63
CSN3P07498 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.11□□□□□ -0.63
CSN3P07498 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.11□□□□□ -0.63
CSN3P07498 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC11.11□□□□□ -0.63
CSN3P07498 AC138649.2-201ENST00000615886 705 ntBASIC11.11□□□□□ -0.63
CSN3P07498 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 AGGF1P1-201ENST00000509500 2073 ntBASIC11.11□□□□□ -0.63
CSN3P07498 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CSN3P07498 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 AC011481.3-201ENST00000623895 5594 ntBASIC11.11□□□□□ -0.63
CSN3P07498 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 AC114271.1-201ENST00000612689 2813 ntBASIC11.11□□□□□ -0.63
CSN3P07498 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSN3P07498 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.11□□□□□ -0.63
CSN3P07498 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.11□□□□□ -0.63
CSN3P07498 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
CSN3P07498 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.1□□□□□ -0.63
CSN3P07498 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.1□□□□□ -0.63
CSN3P07498 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.1□□□□□ -0.63
CSN3P07498 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSN3P07498 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms