Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL359091.4-201ENST00000610052 409 ntBASIC16.69■□□□□ 0.26
POLR3DP05423 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
POLR3DP05423 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR3DP05423 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR3DP05423 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR3DP05423 ODCP-201ENST00000459650 1639 ntBASIC16.69■□□□□ 0.26
POLR3DP05423 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.69■□□□□ 0.26
POLR3DP05423 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.69■□□□□ 0.26
POLR3DP05423 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
POLR3DP05423 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
POLR3DP05423 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR3DP05423 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.69■□□□□ 0.26
POLR3DP05423 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR3DP05423 PDXDC2P-206ENST00000534700 1315 ntBASIC16.69■□□□□ 0.26
POLR3DP05423 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
POLR3DP05423 FAM90A12P-201ENST00000519497 2375 ntBASIC16.69■□□□□ 0.26
POLR3DP05423 FAM90A24P-201ENST00000520792 2369 ntBASIC16.69■□□□□ 0.26
POLR3DP05423 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR3DP05423 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
POLR3DP05423 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR3DP05423 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR3DP05423 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.68■□□□□ 0.26
POLR3DP05423 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 AC019109.1-201ENST00000401725 1874 ntBASIC16.68■□□□□ 0.26
POLR3DP05423 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR3DP05423 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.68■□□□□ 0.26
POLR3DP05423 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.68■□□□□ 0.26
POLR3DP05423 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.68■□□□□ 0.26
POLR3DP05423 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
POLR3DP05423 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.68■□□□□ 0.26
POLR3DP05423 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.68■□□□□ 0.26
POLR3DP05423 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR3DP05423 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.68■□□□□ 0.26
POLR3DP05423 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
POLR3DP05423 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.68■□□□□ 0.26
POLR3DP05423 SNORD3B-1-201ENST00000577988 758 ntBASIC16.68■□□□□ 0.26
POLR3DP05423 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
POLR3DP05423 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.68■□□□□ 0.26
POLR3DP05423 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR3DP05423 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
POLR3DP05423 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR3DP05423 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR3DP05423 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
POLR3DP05423 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
POLR3DP05423 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
POLR3DP05423 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR3DP05423 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.67■□□□□ 0.26
POLR3DP05423 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.67■□□□□ 0.26
POLR3DP05423 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR3DP05423 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR3DP05423 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.67■□□□□ 0.26
POLR3DP05423 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR3DP05423 IGHV3-37-201ENST00000518544 340 ntBASIC16.67■□□□□ 0.26
POLR3DP05423 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR3DP05423 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 AC105137.3-201ENST00000617588 984 ntBASIC16.67■□□□□ 0.26
POLR3DP05423 AC091769.1-201ENST00000619576 568 ntBASIC16.67■□□□□ 0.26
POLR3DP05423 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR3DP05423 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.67■□□□□ 0.26
POLR3DP05423 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR3DP05423 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR3DP05423 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.67■□□□□ 0.26
POLR3DP05423 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR3DP05423 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
POLR3DP05423 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR3DP05423 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.66■□□□□ 0.26
POLR3DP05423 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms