Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
UPK2O00526 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
UPK2O00526 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
UPK2O00526 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.23□□□□□ -0.61
UPK2O00526 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UPK2O00526 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.23□□□□□ -0.61
UPK2O00526 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK2O00526 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.23□□□□□ -0.61
UPK2O00526 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
UPK2O00526 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 LINC00567-201ENST00000569854 3409 ntBASIC11.22□□□□□ -0.61
UPK2O00526 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
UPK2O00526 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
UPK2O00526 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.22□□□□□ -0.61
UPK2O00526 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 RPL13AP20-201ENST00000459725 609 ntBASIC11.22□□□□□ -0.61
UPK2O00526 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.22□□□□□ -0.61
UPK2O00526 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 FAM86HP-204ENST00000513466 959 ntBASIC11.22□□□□□ -0.61
UPK2O00526 AC005740.1-201ENST00000515639 522 ntBASIC11.22□□□□□ -0.61
UPK2O00526 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.22□□□□□ -0.61
UPK2O00526 HILS1-202ENST00000545329 423 ntBASIC11.22□□□□□ -0.61
UPK2O00526 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 AC104982.3-201ENST00000581995 514 ntBASIC11.22□□□□□ -0.61
UPK2O00526 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.22□□□□□ -0.61
UPK2O00526 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
UPK2O00526 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK2O00526 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UPK2O00526 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK2O00526 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
UPK2O00526 AP000437.1-201ENST00000624057 2085 ntBASIC11.21□□□□□ -0.61
UPK2O00526 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.21□□□□□ -0.61
UPK2O00526 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK2O00526 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms