Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 MTDHP2-201ENST00000601468 714 ntBASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
DDX49Q9Y6V7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.71■■□□□ 1.87
DDX49Q9Y6V7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.71■■□□□ 1.87
DDX49Q9Y6V7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.71■■□□□ 1.87
DDX49Q9Y6V7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
DDX49Q9Y6V7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
DDX49Q9Y6V7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
DDX49Q9Y6V7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DDX49Q9Y6V7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.7■■□□□ 1.86
DDX49Q9Y6V7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.7■■□□□ 1.86
DDX49Q9Y6V7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
DDX49Q9Y6V7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DDX49Q9Y6V7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 MIR4466-201ENST00000606121 54 ntBASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX49Q9Y6V7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX49Q9Y6V7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX49Q9Y6V7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 AL136116.3-201ENST00000402907 1138 ntBASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 MIR3621-201ENST00000580529 85 ntBASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 MIR6724-1-201ENST00000616420 92 ntBASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 MIR6724-2-201ENST00000616483 92 ntBASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 MIR6724-4-201ENST00000617390 92 ntBASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 MIR6724-3-201ENST00000622482 92 ntBASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
DDX49Q9Y6V7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 AC090877.2-201ENST00000558441 1738 ntBASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX49Q9Y6V7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
DDX49Q9Y6V7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.64■■□□□ 1.86
DDX49Q9Y6V7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.64■■□□□ 1.86
DDX49Q9Y6V7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
DDX49Q9Y6V7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX49Q9Y6V7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.64■■□□□ 1.85
DDX49Q9Y6V7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 MIR638-201ENST00000385237 100 ntBASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 C1orf229-201ENST00000623686 2258 ntBASIC26.63■■□□□ 1.85
DDX49Q9Y6V7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms