Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 AL136162.1-201ENST00000607711 1078 ntBASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA7Q9Y5G6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGA7Q9Y5G6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 AC135279.3-201ENST00000610945 1311 ntBASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 EDA-201ENST00000338901 1233 ntBASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 SRD5A1P1-201ENST00000442297 786 ntBASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA7Q9Y5G6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGA7Q9Y5G6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
PCDHGA7Q9Y5G6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA7Q9Y5G6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PCDHGA7Q9Y5G6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 AL355001.2-201ENST00000620617 1191 ntBASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGA7Q9Y5G6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA7Q9Y5G6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA7Q9Y5G6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA7Q9Y5G6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA7Q9Y5G6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PCDHGA7Q9Y5G6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 AC026271.2-201ENST00000428091 497 ntBASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
PCDHGA7Q9Y5G6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 AC092666.2-201ENST00000613287 246 ntBASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGA7Q9Y5G6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 AC024257.2-201ENST00000549699 147 ntBASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHGA7Q9Y5G6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
PCDHGA7Q9Y5G6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHGA7Q9Y5G6 AC233723.2-201ENST00000623798 2106 ntBASIC22.07■■□□□ 1.12
PCDHGA7Q9Y5G6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PCDHGA7Q9Y5G6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGA7Q9Y5G6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms