Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 ZNRF2P2-203ENST00000454624 420 ntBASIC21.16■□□□□ 0.98
AP4S1Q9Y587 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 AC092296.2-201ENST00000589470 999 ntBASIC21.16■□□□□ 0.98
AP4S1Q9Y587 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4S1Q9Y587 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4S1Q9Y587 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP4S1Q9Y587 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP4S1Q9Y587 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP4S1Q9Y587 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
AP4S1Q9Y587 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
AP4S1Q9Y587 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4S1Q9Y587 FBXW4P1-201ENST00000426721 2239 ntBASIC21.14■□□□□ 0.97
AP4S1Q9Y587 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.14■□□□□ 0.97
AP4S1Q9Y587 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4S1Q9Y587 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4S1Q9Y587 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4S1Q9Y587 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 AL022069.1-201ENST00000568025 1636 ntBASIC21.12■□□□□ 0.97
AP4S1Q9Y587 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4S1Q9Y587 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 ECEL1P2-201ENST00000461596 1295 ntBASIC21.11■□□□□ 0.97
AP4S1Q9Y587 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP4S1Q9Y587 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.1■□□□□ 0.97
AP4S1Q9Y587 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4S1Q9Y587 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4S1Q9Y587 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4S1Q9Y587 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4S1Q9Y587 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4S1Q9Y587 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
AP4S1Q9Y587 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.08■□□□□ 0.97
AP4S1Q9Y587 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP4S1Q9Y587 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP4S1Q9Y587 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP4S1Q9Y587 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
AP4S1Q9Y587 MIR3648-2-201ENST00000581792 180 ntBASIC21.08■□□□□ 0.97
AP4S1Q9Y587 MIR3648-1-201ENST00000615959 180 ntBASIC21.08■□□□□ 0.97
AP4S1Q9Y587 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 ALDH1A3-203ENST00000557963 1670 ntBASIC21.08■□□□□ 0.96
AP4S1Q9Y587 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP4S1Q9Y587 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms