Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SF3B6Q9Y3B4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SF3B6Q9Y3B4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.87■□□□□ 0.77
SF3B6Q9Y3B4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.87■□□□□ 0.77
SF3B6Q9Y3B4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.87■□□□□ 0.77
SF3B6Q9Y3B4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 KRT18P60-201ENST00000312876 1297 ntBASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 AL592293.1-201ENST00000502889 1188 ntBASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.86■□□□□ 0.77
SF3B6Q9Y3B4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SF3B6Q9Y3B4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
SF3B6Q9Y3B4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SF3B6Q9Y3B4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3B6Q9Y3B4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3B6Q9Y3B4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.83■□□□□ 0.76
SF3B6Q9Y3B4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.83■□□□□ 0.76
SF3B6Q9Y3B4 AC079630.1-202ENST00000618127 1840 ntBASIC19.83■□□□□ 0.76
SF3B6Q9Y3B4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.83■□□□□ 0.76
SF3B6Q9Y3B4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SF3B6Q9Y3B4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 AC131274.2-201ENST00000580697 1507 ntBASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SF3B6Q9Y3B4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 AC129492.7-201ENST00000622992 756 ntBASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B6Q9Y3B4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B6Q9Y3B4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms