Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHA4Q9UN74 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 DUSP8P3-201ENST00000399571 1760 ntBASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 AL353803.4-201ENST00000565882 1934 ntBASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PCDHA4Q9UN74 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 LINC01529-204ENST00000636474 1715 ntBASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA4Q9UN74 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 SRD5A1P1-201ENST00000442297 786 ntBASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA4Q9UN74 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA4Q9UN74 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA4Q9UN74 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHA4Q9UN74 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHA4Q9UN74 DUX4L4-201ENST00000566884 1269 ntBASIC25.65■■□□□ 1.7
PCDHA4Q9UN74 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA4Q9UN74 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA4Q9UN74 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHA4Q9UN74 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA4Q9UN74 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA4Q9UN74 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 AC241377.3-202ENST00000626088 1088 ntBASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 AC241585.3-202ENST00000628937 1088 ntBASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 AC245100.8-202ENST00000629247 1058 ntBASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHA4Q9UN74 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHA4Q9UN74 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 AL136116.3-201ENST00000402907 1138 ntBASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 AC099791.2-201ENST00000605725 427 ntBASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDHA4Q9UN74 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA4Q9UN74 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA4Q9UN74 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA4Q9UN74 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA4Q9UN74 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHA4Q9UN74 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms