Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRFN1Q9P244 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRFN1Q9P244 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LRFN1Q9P244 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.58■□□□□ 0.88
LRFN1Q9P244 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
LRFN1Q9P244 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN1Q9P244 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN1Q9P244 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN1Q9P244 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRFN1Q9P244 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN1Q9P244 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.57■□□□□ 0.88
LRFN1Q9P244 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LRFN1Q9P244 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.57■□□□□ 0.88
LRFN1Q9P244 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.57■□□□□ 0.88
LRFN1Q9P244 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN1Q9P244 AC233992.3-201ENST00000607491 485 ntBASIC20.57■□□□□ 0.88
LRFN1Q9P244 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN1Q9P244 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRFN1Q9P244 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRFN1Q9P244 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN1Q9P244 BX842568.3-201ENST00000418104 571 ntBASIC20.56■□□□□ 0.88
LRFN1Q9P244 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN1Q9P244 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
LRFN1Q9P244 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRFN1Q9P244 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN1Q9P244 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN1Q9P244 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN1Q9P244 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LRFN1Q9P244 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.55■□□□□ 0.88
LRFN1Q9P244 FP325331.1-202ENST00000623531 1380 ntBASIC20.55■□□□□ 0.88
LRFN1Q9P244 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.55■□□□□ 0.88
LRFN1Q9P244 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.55■□□□□ 0.88
LRFN1Q9P244 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LRFN1Q9P244 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRFN1Q9P244 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.54■□□□□ 0.88
LRFN1Q9P244 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.54■□□□□ 0.88
LRFN1Q9P244 AL139125.2-201ENST00000623134 1869 ntBASIC20.54■□□□□ 0.88
LRFN1Q9P244 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.54■□□□□ 0.88
LRFN1Q9P244 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 RARRES2P6-201ENST00000567333 442 ntBASIC20.54■□□□□ 0.88
LRFN1Q9P244 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.54■□□□□ 0.88
LRFN1Q9P244 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.54■□□□□ 0.88
LRFN1Q9P244 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LRFN1Q9P244 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.54■□□□□ 0.88
LRFN1Q9P244 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRFN1Q9P244 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN1Q9P244 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN1Q9P244 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN1Q9P244 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRFN1Q9P244 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRFN1Q9P244 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN1Q9P244 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRFN1Q9P244 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN1Q9P244 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRFN1Q9P244 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.52■□□□□ 0.88
LRFN1Q9P244 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRFN1Q9P244 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN1Q9P244 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.52■□□□□ 0.88
LRFN1Q9P244 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.52■□□□□ 0.88
LRFN1Q9P244 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRFN1Q9P244 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN1Q9P244 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
LRFN1Q9P244 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN1Q9P244 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN1Q9P244 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.51■□□□□ 0.87
LRFN1Q9P244 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN1Q9P244 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
LRFN1Q9P244 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN1Q9P244 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.51■□□□□ 0.87
LRFN1Q9P244 AC144652.1-201ENST00000609974 1624 ntBASIC20.51■□□□□ 0.87
LRFN1Q9P244 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN1Q9P244 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN1Q9P244 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN1Q9P244 AC004812.2-201ENST00000611079 2094 ntBASIC20.5■□□□□ 0.87
LRFN1Q9P244 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN1Q9P244 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRFN1Q9P244 AC133637.1-201ENST00000624115 1537 ntBASIC20.5■□□□□ 0.87
LRFN1Q9P244 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN1Q9P244 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.5■□□□□ 0.87
LRFN1Q9P244 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.5■□□□□ 0.87
LRFN1Q9P244 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN1Q9P244 DUX4L4-201ENST00000566884 1269 ntBASIC20.5■□□□□ 0.87
LRFN1Q9P244 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.5■□□□□ 0.87
LRFN1Q9P244 AC126544.1-201ENST00000580842 1059 ntBASIC20.5■□□□□ 0.87
LRFN1Q9P244 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms