Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MRPL39Q9NYK5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MRPL39Q9NYK5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL39Q9NYK5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL39Q9NYK5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.39■□□□□ 0.85
MRPL39Q9NYK5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MRPL39Q9NYK5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL39Q9NYK5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MRPL39Q9NYK5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
MRPL39Q9NYK5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 Z92544.1-202ENST00000571933 1220 ntBASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 ANOS2P-203ENST00000472227 1816 ntBASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MRPL39Q9NYK5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MRPL39Q9NYK5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 AC092068.2-201ENST00000590491 1708 ntBASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
MRPL39Q9NYK5 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 KRT125P-201ENST00000546827 989 ntBASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 MIR6722-201ENST00000617286 78 ntBASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.35■□□□□ 0.85
MRPL39Q9NYK5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MRPL39Q9NYK5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms