Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
POLE3Q9NRF9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 AC239859.2-201ENST00000444165 318 ntBASIC20.76■□□□□ 0.91
POLE3Q9NRF9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 MTDHP2-201ENST00000601468 714 ntBASIC20.76■□□□□ 0.91
POLE3Q9NRF9 AL451085.2-201ENST00000605085 799 ntBASIC20.76■□□□□ 0.91
POLE3Q9NRF9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
POLE3Q9NRF9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
POLE3Q9NRF9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.74■□□□□ 0.91
POLE3Q9NRF9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLE3Q9NRF9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.73■□□□□ 0.91
POLE3Q9NRF9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.73■□□□□ 0.91
POLE3Q9NRF9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.73■□□□□ 0.91
POLE3Q9NRF9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLE3Q9NRF9 AC144652.1-201ENST00000609974 1624 ntBASIC20.72■□□□□ 0.91
POLE3Q9NRF9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLE3Q9NRF9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 AC010997.5-201ENST00000609182 354 ntBASIC20.71■□□□□ 0.91
POLE3Q9NRF9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLE3Q9NRF9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLE3Q9NRF9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLE3Q9NRF9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLE3Q9NRF9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLE3Q9NRF9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLE3Q9NRF9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
POLE3Q9NRF9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLE3Q9NRF9 FP325331.1-202ENST00000623531 1380 ntBASIC20.7■□□□□ 0.9
POLE3Q9NRF9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLE3Q9NRF9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms