Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.86■□□□□ 0.93
MMP25Q9NPA2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
MMP25Q9NPA2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 MIR3181-201ENST00000578512 73 ntBASIC20.85■□□□□ 0.93
MMP25Q9NPA2 AC136469.2-201ENST00000623944 1028 ntBASIC20.85■□□□□ 0.93
MMP25Q9NPA2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP25Q9NPA2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP25Q9NPA2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.83■□□□□ 0.93
MMP25Q9NPA2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP25Q9NPA2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.83■□□□□ 0.93
MMP25Q9NPA2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.83■□□□□ 0.93
MMP25Q9NPA2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MMP25Q9NPA2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MMP25Q9NPA2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MMP25Q9NPA2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MMP25Q9NPA2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
MMP25Q9NPA2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP25Q9NPA2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP25Q9NPA2 MIR939-201ENST00000401314 82 ntBASIC20.82■□□□□ 0.92
MMP25Q9NPA2 AP001330.3-201ENST00000520123 633 ntBASIC20.82■□□□□ 0.92
MMP25Q9NPA2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.82■□□□□ 0.92
MMP25Q9NPA2 AF213884.3-201ENST00000563833 479 ntBASIC20.82■□□□□ 0.92
MMP25Q9NPA2 AL136967.2-201ENST00000623968 743 ntBASIC20.82■□□□□ 0.92
MMP25Q9NPA2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.82■□□□□ 0.92
MMP25Q9NPA2 FP325331.1-202ENST00000623531 1380 ntBASIC20.82■□□□□ 0.92
MMP25Q9NPA2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 pRNA.6-201ENST00000610482 90 ntBASIC20.81■□□□□ 0.92
MMP25Q9NPA2 pRNA.5-201ENST00000612139 90 ntBASIC20.81■□□□□ 0.92
MMP25Q9NPA2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 pRNA.11-201ENST00000618423 90 ntBASIC20.81■□□□□ 0.92
MMP25Q9NPA2 pRNA.13-201ENST00000619112 90 ntBASIC20.81■□□□□ 0.92
MMP25Q9NPA2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
MMP25Q9NPA2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 AC091305.1-201ENST00000479476 895 ntBASIC20.8■□□□□ 0.92
MMP25Q9NPA2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
MMP25Q9NPA2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP25Q9NPA2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP25Q9NPA2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MMP25Q9NPA2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.79■□□□□ 0.92
MMP25Q9NPA2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP25Q9NPA2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP25Q9NPA2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP25Q9NPA2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MMP25Q9NPA2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MMP25Q9NPA2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MMP25Q9NPA2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP25Q9NPA2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP25Q9NPA2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms