Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ELL3Q9HB65 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ELL3Q9HB65 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ELL3Q9HB65 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ELL3Q9HB65 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ELL3Q9HB65 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.43■□□□□ 0.7
ELL3Q9HB65 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
ELL3Q9HB65 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ELL3Q9HB65 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ELL3Q9HB65 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.43■□□□□ 0.7
ELL3Q9HB65 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ELL3Q9HB65 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ELL3Q9HB65 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.42■□□□□ 0.7
ELL3Q9HB65 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ELL3Q9HB65 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ELL3Q9HB65 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
ELL3Q9HB65 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.42■□□□□ 0.7
ELL3Q9HB65 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ELL3Q9HB65 AC120024.1-201ENST00000562672 995 ntBASIC19.42■□□□□ 0.7
ELL3Q9HB65 AC103724.3-201ENST00000564481 992 ntBASIC19.42■□□□□ 0.7
ELL3Q9HB65 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.42■□□□□ 0.7
ELL3Q9HB65 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ELL3Q9HB65 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ELL3Q9HB65 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.41■□□□□ 0.7
ELL3Q9HB65 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ELL3Q9HB65 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ELL3Q9HB65 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.41■□□□□ 0.7
ELL3Q9HB65 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ELL3Q9HB65 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ELL3Q9HB65 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ELL3Q9HB65 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ELL3Q9HB65 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.4■□□□□ 0.7
ELL3Q9HB65 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
ELL3Q9HB65 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.4■□□□□ 0.7
ELL3Q9HB65 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ELL3Q9HB65 THA1P-201ENST00000590384 1145 ntBASIC19.4■□□□□ 0.7
ELL3Q9HB65 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.4■□□□□ 0.7
ELL3Q9HB65 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ELL3Q9HB65 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ELL3Q9HB65 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ELL3Q9HB65 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ELL3Q9HB65 ALDH1A3-203ENST00000557963 1670 ntBASIC19.4■□□□□ 0.7
ELL3Q9HB65 AC092068.2-201ENST00000590491 1708 ntBASIC19.39■□□□□ 0.7
ELL3Q9HB65 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ELL3Q9HB65 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ELL3Q9HB65 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ELL3Q9HB65 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ELL3Q9HB65 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.39■□□□□ 0.69
ELL3Q9HB65 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ELL3Q9HB65 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ELL3Q9HB65 AC131274.2-201ENST00000580697 1507 ntBASIC19.39■□□□□ 0.69
ELL3Q9HB65 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ELL3Q9HB65 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ELL3Q9HB65 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ELL3Q9HB65 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ELL3Q9HB65 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ELL3Q9HB65 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.38■□□□□ 0.69
ELL3Q9HB65 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ELL3Q9HB65 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.38■□□□□ 0.69
ELL3Q9HB65 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.37■□□□□ 0.69
ELL3Q9HB65 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ELL3Q9HB65 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ELL3Q9HB65 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ELL3Q9HB65 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ELL3Q9HB65 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ELL3Q9HB65 AL031848.2-201ENST00000607670 837 ntBASIC19.37■□□□□ 0.69
ELL3Q9HB65 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ELL3Q9HB65 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.37■□□□□ 0.69
ELL3Q9HB65 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ELL3Q9HB65 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 AC079834.2-201ENST00000609776 1949 ntBASIC19.36■□□□□ 0.69
ELL3Q9HB65 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.36■□□□□ 0.69
ELL3Q9HB65 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ELL3Q9HB65 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ELL3Q9HB65 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ELL3Q9HB65 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.35■□□□□ 0.69
ELL3Q9HB65 DUSP8P3-201ENST00000399571 1760 ntBASIC19.35■□□□□ 0.69
ELL3Q9HB65 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.35■□□□□ 0.69
ELL3Q9HB65 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ELL3Q9HB65 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ELL3Q9HB65 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ELL3Q9HB65 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ELL3Q9HB65 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ELL3Q9HB65 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ELL3Q9HB65 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ELL3Q9HB65 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms